[2023-03-21 18:18:56,975] multiqc [DEBUG ] This is MultiQC v1.15.dev0 [2023-03-21 18:18:56,975] multiqc [DEBUG ] Command used: /home/djn/.local/lib/python3.10/site-packages/multiqc/__main__.py --interactive -o multiqc_from_fastQC . [2023-03-21 18:18:57,213] multiqc [DEBUG ] Latest MultiQC version is v1.14 [2023-03-21 18:18:57,213] multiqc [DEBUG ] Working dir : /media/djn/6TB/SRA/bam/GEO_GCF [2023-03-21 18:18:57,213] multiqc [DEBUG ] Template : default [2023-03-21 18:18:57,213] multiqc [DEBUG ] Running Python 3.10.6 (main, Mar 10 2023, 10:55:28) [GCC 11.3.0] [2023-03-21 18:18:57,213] multiqc [DEBUG ] Analysing modules: custom_content, ccs, ngsderive, purple, conpair, lima, peddy, somalier, methylQA, mosdepth, phantompeakqualtools, qualimap, preseq, hifiasm, quast, qorts, rna_seqc, rockhopper, rsem, rseqc, busco, bustools, goleft_indexcov, gffcompare, disambiguate, supernova, deeptools, sargasso, verifybamid, mirtrace, happy, mirtop, sambamba, gopeaks, homer, hops, macs2, theta2, snpeff, gatk, htseq, bcftools, featureCounts, fgbio, dragen, dragen_fastqc, dedup, pbmarkdup, damageprofiler, biobambam2, jcvi, mtnucratio, picard, vep, sentieon, prokka, qc3C, nanostat, samblaster, samtools, sexdeterrmine, eigenstratdatabasetools, bamtools, jellyfish, vcftools, longranger, stacks, varscan2, snippy, umitools, bbmap, bismark, biscuit, diamond, hicexplorer, hicup, hicpro, salmon, kallisto, slamdunk, star, hisat2, tophat, bowtie2, bowtie1, cellranger, snpsplit, odgi, pangolin, nextclade, humid, kat, leehom, adapterRemoval, bbduk, clipandmerge, cutadapt, flexbar, kaiju, kraken, malt, motus, trimmomatic, sickle, skewer, sortmerna, biobloomtools, fastq_screen, afterqc, fastp, fastqc, filtlong, prinseqplusplus, pychopper, porechop, pycoqc, minionqc, anglerfish, multivcfanalyzer, clusterflow, checkqc, bcl2fastq, bclconvert, interop, ivar, flash, seqyclean, optitype, whatshap [2023-03-21 18:18:57,213] multiqc [DEBUG ] Using temporary directory for creating report: /tmp/tmpftinjz91 [2023-03-21 18:18:57,312] multiqc [INFO ] Search path : /media/djn/6TB/SRA/bam/GEO_GCF [2023-03-21 18:19:01,609] multiqc [DEBUG ] Summary of files that were skipped by the search: [skipped_module_specific_max_filesize: 2444] // [skipped_no_match: 443] // [skipped_ignore_pattern: 221] // [skipped_directory_fn_ignore_dirs: 1] [2023-03-21 18:19:01,762] multiqc.plots.bargraph [DEBUG ] Using matplotlib version 3.7.0 [2023-03-21 18:19:01,763] multiqc.plots.linegraph [DEBUG ] Using matplotlib version 3.7.0 [2023-03-21 18:19:01,763] multiqc [DEBUG ] No samples found: custom_content [2023-03-21 18:19:01,786] multiqc.modules.hisat2.hisat2 [INFO ] Found 220 reports [2023-03-21 18:19:01,987] multiqc.modules.fastqc.fastqc [INFO ] Found 221 reports [2023-03-21 18:19:03,129] multiqc [INFO ] Compressing plot data [2023-03-21 18:19:04,673] multiqc [INFO ] Report : multiqc_from_fastQC/multiqc_report.html [2023-03-21 18:19:04,673] multiqc [INFO ] Data : multiqc_from_fastQC/multiqc_data [2023-03-21 18:19:04,673] multiqc [DEBUG ] Moving data file from '/tmp/tmpftinjz91/multiqc_data' to 'multiqc_from_fastQC/multiqc_data' [2023-03-21 18:19:04,724] multiqc [INFO ] MultiQC complete